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Agricultural & Biosystems Engineering

 

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Journal Papers

McDaniel, R.L. and M.L. Soupir.  The effect of manure particles on E. coli transport from direct fecal deposits under steady-state flows.   (under preparation).

Pandey, P.K. *, Pieter van der Zaag, M.L. Soupir, and V.P. Singh. (under review) A model for predicting supplemental irrigation and potential rainwater harvesting for rainfed agriculture.

Pandey, P.K., M.L. Soupir, M. Haddad, J. J. Rothwell. (under review) Assessing the impacts of watershed indexes and precipitation on spatial in-stream E. coli concentrations. 

Pandey, P.K. and M.L. Soupir.  Questioning the U.S. EPA’s criteria for assessing stream pathogen impairments.  (under review).

Hoang, T.T.T., M.L. Soupir, and A. Bhandari. (under review). Occurrence of tylosin-resistant enterococci in swine manure and tile drainage systems under no-till management.

McDaniel, R.L., M.L. Soupir, R. Tuttle, and A. Cervantes. Release, dispersion, and resuspension of E. coli from direct fecal deposits under controlled flows.  (under review).

Pandey, P.K. and M.L. Soupir.  (under review). A new method to estimate the variation of hourly and long term average daily global solar radiation on the horizontal surface.

Pandey, P.K., M.L. Soupir, and C.R. Rehmann.  2011. Predicting resuspension of E. coli from streambed sediments. Water Research. DOI:10.1016/j.watres.2011.10.019

Liu, P., M.L. Soupir, M.R. Zwonitzer, B. Huss, L. Jarboe.  2011.  Antibiotic resistance in agricultural E. coli isolates correlates with attachment to quartz.  Applied and Environmental Microbiology.77(19):6945-6953.DOI: 10.1128/AEM.00717-11.

Pandey, P.K. and M.L. Soupir.  2011. E. coli inactivation kinetics in anaerobic digestion of solid dairy manure under low, mesophilic and thermophilic temperatures. AMB Express. DOI: 10.1186/2191-0855-1-18.

Pandey, P.K., M.L. Soupir, V.P. Singh, and S.N. Panda. 2011. Modeling Rainwater Storage in Distributed Reservoir Systems in Humid Subtropical and Tropical Savannah Regions. Water Resources Management.  DOI: 10.1007/s11269-011-9847-5.

Pandey, P.K., P.M. Ndegwa, M.L. Soupir, J.R. Alldredge, and M. Pitts.  2011.  Efficacies of inocula on the startup of anaerobic reactors treating dairy manure under stirred and unstirred conditions.  Biomass and Bioenergy. 35(7): 2705 - 2720. 

Soupir, M.L. and S. Mostaghimi. 2011. E. coli and enterococci attachment to particles in runoff from various pastureland management scenarios.  Water, Air and Soil Pollution. 216: 167-178.

Pandey, P.K., P.M. Ndegwa, J.R. Alldredge, M. Pitts, and M.L. Soupir.  2010.  Effects of granules on start-up of anaerobic reactors treating dairy wastewater.  Bioprocess and Biosystems Engineering. 33:833-845.

Soupir, M.L., S. Mostaghimi, and T. Dillaha.  2010.  Attachment of Escherichia coli and enterococci to particles in runoff.  Journal of Environmental Quality. 39(3): 1019-1027.

Rehmann, C.R. and M.L. Soupir. 2009.  Importance of interactions between the water column and the sediment for microbial concentrations in streams.  Water Research. 43: 4579-4589. DOI: 10.1016/j.watres.2009.06.049.

Soupir, M.L., S. Mostaghimi, and C.E. Mitchem, Jr.  2009.  A comparative study of stream-gaging techniques employed during low flows.  Journal of the American Water Resources Association. 45(1): 110-122.  DOI: 10.1111 ⁄ j.1752-1688.2008.00264.x. 

Soupir, M.L., S. Mostaghimi, and J. Lou.  2008.  Die-off of E. coli and enterococci in dairy cowpats.  Transactions of the ASABE. 51(6): 1987-1996.

Soupir, M.L., S. Mostaghimi, and N.G. Love.  2008.  A method to partition between attached and unattached E. coli in runoff from agricultural lands.  Journal of the American Water Resources Association. 44(6): 1591-1599.  DOI: 10.1111 ⁄ j.1752-1688.2008.00262.x.

Benham, B.L., C. Baffaut, R.W. Zeckoski, Y.A. Pachepsky, K.R. Mankin A.M. Sadeghi, K.M. Brannan, M.L. Soupir, and M.J. Habersack.  2006.  Modeling pathogen fate and transport in watersheds to support TMDLs.  Transactions of the ASABE. 49(4):987-1002.

Soupir, M.L., S. Mostaghimi, and E.R. Yagow.  2006.  Nutrient transport from livestock manure applied to pastureland using phosphorus-based management strategies.  Journal of Environmental Quality. 35:1269-1278. 

Soupir, M.L., S. Mostaghimi, E.R. Yagow, C. Hagedorn, and D.H. Vaughan.  2006.  Transport of fecal bacteria from poultry litter and cattle manures applied to pastureland.  Water, Air and Soil Pollution. 169(1-4):125-136. 

Soupir, M.L., S. Mostaghimi, A. Masters, K.A. Flahive, D.H. Vaughan, A. Mendez, and P.W. McClellan.  2004.  The effectiveness of polyacrylamide (PAM) in reducing runoff, TSS and nutrient losses from construction sites.  Journal of the American Water Resources Association.  40(1): 53-66.  


Conference Papers, Proceedings, & Presentations

Moorman, T.B., M.L. Soupir, J.L. Garder*.  Transport of tylosin and tylosin-resistance genes in subsurface drainage water from manured fields.  Poster Presentation at the ASA CSSA SSSA International Annual Meeting in San Antonio, Texas.  10/16/11 – 10/19/11.

Liu, P., M.L. Soupir, M.R. Zwonitzer*, B. Huss*, L.R. Jarobe.  Antibitoic Resistance in Agricultural E. coli Isolates Correlates with Attachment to Quartz.  Presentation at the 71st Annual Meeting North Central Branch of the American Society for Microbiology in Des Moines, Iowa.  10/7/11 – 10/8/11.

Hruby, C.E., M. Soupir, T.B. Moorman.  Transport of Salmonella spp. and indicator bacteria to drainage tile waters under cornfields receiving poultry manure.  Presentation at the Geological Society of America, Annual Meeting in Minneapolis, Minnesota.  10/9/11 – 10/12/11

Pandey, P.K. and Soupir, M.L. 2011. Impacts of temperatures on biogas production in dairy manure anaerobic digestion.  2011 International Conference on Power and Energy Systems (ICPES 2011), June 10 - 12, Oral Presentation, Chengdu, China.  Proceedings of 2011 4th IEEE International Conference on Computer Science and Information Technology, pp 721-724.

Pandey, P.K., Soupir, M.L, Majumdar, M., Kaiser, M. 2011. Prediction of stream water column E. coli concentration. Computational Fluid Dynamics Society of Canada (CFDSC) annual conference, April 27 – 29, Oral Presentation, Montreal, Canada.

Hruby, C.E. *, M.L. Soupir, R. Kanwar, C. Pederson.  2011. Bacteria Concentrations in drainage tile waters from plots receiving chicken layer manure.  St. Joseph, MI.:  ASABE.  Oral presentation, Louisville, KY.

Bhandari, A., Hoover, N. *, Soupir, M. Laboratory-Scale Investigation of Denitrification ‘Woodchip’ Bioreactors for Agricultural Drainage Water Treatment.  Presented at the World Environmental & Water Resources Congress 2011 in Palm Springs, CA. 05/22/11 – 05/26/11.

McDaniel, R.L.*, Soupir, M.L., R. Tuttle*, C.R. Rehmann. 2010.  Release and resuspension of E. coli from direct fecal deposits in streams.  In: Abstract Proceedings of the American Water Resources Association 2010 Annual Conference.  Middleburg, VA.: AWRA. Oral presentation, Philadelphia, PA.

Hoang, T.T.T*. and M.L. Soupir. 2010.  Occurrence of tylosin-resistant enterococci in swine manure and tile drainage systems under no-till management.  ASABE 9th International Drainage Symposium: “Sustainable Drainage Water Management in a Changing Environment.” CIGR Book of Abstracts.  Oral presentation, Quebec, Canada.

Soupir, M.L., R.L. McDaniel*, C.R. Rehmann. 2010.  Resuspension of E. coli from direct fecal deposits in streams.  21st Century Watershed Technology: Improving Water Quality and Environment.  Oral presentation, Earth University, Costa Rica.

Zwonitzer, M. *, M.L. Soupir, and L.R. Jarboe.  2010.  Exploring the relationship between attachment and resistance of Escherichia coli collected from organic and commercial swine operations.  Poster presented at the ASA-CSSA-SSSA International Annual Meeting in Long Beach, CA. 10/31/10 – 11/3/10.

Soupir, M.L., T.T.T. Hoang*, T. Moorman, A. Bhandari. 2010. Transport of tylosin-resistant enterococci into tile drainage systems.  11th Annual Iowa-Minnesota Drainage Research Forum in Owatonna, Minnesota. 11/23/10.

Hruby, C.E. *, M.L. Soupir, R. Kanwar, C. Pederson. 2010. Evaluating the impacts of layer hen manure application practices on pathogen and hormone transport through Iowa soils. Poster presentation at the Partnership to build capacity in integrated international water resource management expertise in Amman, Jordan. 3/14/10 to 3/18/10.

Bhandari, A., Hoover, N. *, Christianson, L., Helmers, M., Soupir, M. Denitrification ‘woodchip’ bioreactors for agricultural drainage water treatment. Poster presented at the Water and the Future of Kansas Conference in Topeka, KS. 10/26/10.

Soupir, M.L. * 2010. EPA Region 7 TMDL Grant Topic: Improving SWAT for developing bacterial TMDLs. Presented at the EPA R7 2010 Impaired Waters and Watersheds Conference in Kansas City, MO. 5/10/10 – 5/12/10.

Pandey, P.K. *, M.L. Soupir, and C.R. Rehmann.  2010.  Influence of confined feeding operations on in-stream E. coli sediment concentrations. St. Joseph, MI.:  ASABE. 

Zwonitzer, M.R.*, M.L. Soupir, and L.R. Jarboe.  2009.  Exploring the relationship between transport, resistance, and virulence factors of Escherichia coli collected from swine manure.  ASA-CSSA-SSSA International Annual Meeting, Pittsburg, PA. 11/1/09 – 11/5/09. Poster.

Soupir, M.L.*, M.R. Zwonitzer, T.T.T. Hoang, R.L. McDaniel, and P.K. Pandey. 2009.   Fate and transport of microorganisms from agricultural landscapes.  National Academy of Engineering China-America Frontiers of Engineering Symposium, Changsha, Hunan Province, China. 10/17/09 – 10/21/09. Poster.

Soupir, M.L.* and S. Mostaghimi.  2009.  Predicting in-field decay and edge-of-field transport of fecal indicators.  5th International SWAT Conference, August 5-7, Boulder, Colorado.

Pandey, P.K. *, M.L. Soupir, and P. M. Ndegwa. 2009.  Distribution of microbial community in dairy manure applied to agricultural land.   ASABE International Conference, June 21-25, Reno, Nevada.

Zwonitzer, M.*, M.L. Soupir, and S. Mostaghimi.  2009.  Transport of nutrients from various pastureland management scenarios.  ASABE International Conference, June 21-25, Reno, Nevada.

Hoang, T.T.T.*, M.L. Soupir, and A. Bhandari.  2009.  Transport of antibiotic resistant enterococci through porous media.  ASABE International Conference, June 21-25, Reno, Nevada.

Zwonitzer, M.*, M.L. Soupir, and L.R. Jarboe.  2009.  E. coli transport, resistance, and virulence factors from land applied swine slurry.  The Dahlia Greidinger Memorial Symposium 2009, “Crop Production in the 21st Century: Global Climate Change, Environmental Risks and Water Scarcity”, March 2-5, 2009, Technion-IIT Haifa, Israel.

Zwonitzer, M.*, M.L. Soupir, and S. Mostaghimi.  2009.  Transport of nutrients from various pastureland management scenarios.  The Dahlia Greidinger Memorial Symposium 2009, “Crop Production in the 21st Century: Global Climate Change, Environmental Risks and Water Scarcity”, March 2-5, 2009, Technion-IIT Haifa, Israel.

Soupir, M. L. and S. Mostaghimi*.  2008.  Attachment of bacterial indicators to particulates in runoff from various soils.  21st Century Watershed Technology:  Improving Water Quality and Environment.  March 29 – April 3, Concepcion, Chile.  St. Joseph, MI.:  ASABE. 

Soupir*, M. L. and S. Mostaghimi.  2007.  Fate and Transport of E. coli and Enterococcus from pasturelands.  Paper No. 072274.  St. Joseph, MI.:  ASABE.

Soupir*, M.L. and S. Mostaghimi.  2007.  Fate and Transport of Pathogen Indicators from Pasturelands.  In:  “The 23rd Annual Research Symposium and Exposition book of abstracts”, pp. 55.  Graduate Student Assembly, Virginia Tech.

Soupir*, M.L. and S. Mostaghimi.  2007.  Transport of Pathogen Indicators from Pasturelands.  In:  “Virginia Tech Deans’ Forum on the Environment book of abstracts”, pp. 206. 

Benham*, B.L., C. Baffaut, R.W. Zeckoski, Y.A. Pachepsky, K.R. Mankin A.M. Sadeghi, K.M. Brannan, M.L. Soupir, and M.J. Habersack.  2006.  Modeling pathogen fate and transport in watersheds to support TMDLs.  Paper No. 062295.  St. Joseph, MI.:  ASABE.

Soupir*, M. L. and S. Mostaghimi.  2006.  Partitioning of E. coli and Enterococcus between planktonic and sorbed phases in runoff from pasturelands.  Paper No. 062197.  St. Joseph, MI.:  ASABE.

Soupir*, M. L. and S. Mostaghimi.  2006.  Transport of fecal bacteria from poultry litter and cattle manures applied to pastureland.  In:  Virginia Lakes and Watersheds Association Annual Water Conference Proceedings “Meeting Virginia Water Challenges”, pp. 36. S. Stein, ed.

Soupir*, M. L. and S. Mostaghimi.  2005.  Improved enumeration of planktonic and attached fecal indicators in runoff from pastures.  In: Extended Abstract Proceedings of the American Water Resources Association 2005 Annual Conference.  C. Steward, ed.  Middleburg, VA.: AWRA

Mostaghimi*, S., M.L. Soupir, and C. Hagedorn. 2004. Release and transport of bacteria from livestock manure applied to pastureland.  In: Advances in Hydro-Science and -Engineering Volume VI, pp. 66-67. M.S. Altinakar, S.S.Y. Wang, K.P. Holz, M. Kawahara, eds. Oxford, M.S.: National Center for Computational Hydroscience and Engineering. 

Soupir*, M. L., S. Mostaghimi, C. Hagedorn, D.H. Vaughan, and E.R. Yagow.  2004.  Release and transport of nutrients from livestock manure applied to pastureland.  Paper No. 042214.  St. Joseph, MI.:  ASAE. 

Soupir*, M. L. and S. Mostaghimi.  2003.  Bacteria release and transport from livestock manure applied to pastureland.  Paper No. 032149.  St. Joseph, MI.:  ASAE. 

Peterie* (Soupir), M., A. Davisson, M. Hunter, A. Masters*, S. Radki, K. Flahive, S. Mostaghimi, and D.H. Vaughan. 2000.  A comparative investigation of the effectiveness of polyacrylamide (PAM) for erosion control in urban areas.  Paper No. 002176.  St. Joseph, MI.:  ASAE.   

Predicala*, B., R.G. Maghirang, J. Urban, R. Goodband, K. Ocfemia and M. Peterie (Soupir). 2000. Characterization of particulate matter in swine buildings. In: Proceedings of the Second International Conference on Air Pollution from Agricultural Operations, pp. 321-328.  St. Joseph, MI.:  ASAE.