Laboratory of Evolutionary and Ecological Genomics

Dr. Nicole Valenzuela

Department of Ecology, Evolution, and Organismal Biology
Iowa State University
239 Bessey Hall
Ames, IA 50011
(515) 294-1285
nvalenzu@iastate.edu

People


 

Dr. Nicole Valenzuela

I am an evolutionary ecologist, and my research involves studies of:
  • Comparative Evolutionary Genomics
  • Ecological Genomics
  • Genome Evolution
  • Evolutionary Developmental Biology
  • Sex Determination
  • Population and Ecological Genetics
  • Life History Evolution
  • Herpetology
  • Tropical Biology
  • Conservation

 


Claudia Ceballos, M.Sc.

I am a fourth year Ph.D. student. I have experience in conservation and life history of turtles. I am interested in understanding the causes and consequences of phenotypic evolution. My current work focuses on phenotypic plasticity of body growth in Podocnemis expansa and Chelydra serpentina and its effect on sexual size dimorphism and Rensch's rule in turtles. My work is funded by the National Science Foundation (DEB 0808047) and the Turtle Conservation Fund, to N. Valenzuela (PI) and C Ceballos (CoPI).

Claudia’s Website

 


Pedro Martinez

I am a third year Ph.D. student. I am working on sex chromosome evolution and comparative gene mapping in turtles.

My work is funded by the National Science Foundation (MCB 0815354 to N. Valenzuela [PI] and S.V. Edwards [CoPI, Harvard University].

 

2008. Martinez, P., Ezaz T., Valenzuela, N., Georges, A., and Graves J.A.M. An XX/XY heteromorphic sex chromosome system in the Australian chelid turtle Emydura macquarii, a new piece in the puzzle of sex chromosome evolution in turtles. Chromosome Research: 16(6): 815-825. DOI 10.1007/s10577-008-1228-4.

 


Dr. Tibisay Escalona

I am an NSF postdoctoral fellow. I am very interested in the ecology, life history evolution and conservation of freshwater turtles in the Neotropics. I am working on the metapopulation genetic analysis of Podocnemis unifilis turtles in South America.

My work is funded by the National Science Foundation (DBI 0511958 to T. Excalona), and the Scott Neotropical Fund from the Cleveland Zoo (to N. Valenzuela [PI] and T. Escalona [CoPI]).

Tibisay’s Website

2009. Escalona, T., Engstrom T.N., Hernandez O.E., Bock B.C., Vogt R.C. and Valenzuela N. Population genetics of the endangered South American freshwater turtle, Podocnemis unifilis, inferred from microsatellite DNA data. Conservation Genetics. DOI 10.1007/s10592-008-9746-3

 


Dr. Jennifer Neuwald

I am a postdoctoral fellow. My previous work focused on the temporal changes in population genetic dynamics of the eastern collared lizard, Crotaphytus collaris collaris, in response to forest fire management. I am now working on an eco-genomics project to study the effect of fluctuating temperature on the expression of genes involved in gonadogenesis in TSD turtles.

My work is funded by the National Science Foundation (IOS 0743284 to N. Valenzuela).

Jennifer's Website

 


Past Lab Members

Jennifer Deitloff

I completed my Ph.D. in 2008. My work focused on the ecological processes responsible for species co-ocurrence patterns in two species of Plethodon salamanders. I was co-advised by Dean Adams.

 


Dr. Takahito Shikano

Postdoctoral associate. Taka worked on the molecular evolution of sex related genes across reptiles and other vertebrates that possess contrasting sex determining mechanisms, in order to shed light on the evolution of sex determination.

  • 2006. Valenzuela, N., LeClere A.R, and Shikano T. Comparative expression of steroidogenic factor 1 in Chrysemys picta and Apalone mutica turtles with environmental and genotypic sex determination. Evol. Dev. 8 (5): 424-432.
  • 2007. Valenzuela, N. and Shikano T. Embryological ontogeny of Aromatase gene expression in Chrysemys picta and Apalone mutica turtles: comparative patterns within and across temperature-dependent and genotypic sex-determining mechanisms. Dev. Genes Evol. 217: 55-62.

 


Andrea R. LeClere

I graduated from the Biology program at ISU. For my honors thesis I worked on a project aimed to compare the expression profiles of sex genes (genes involved in sex differentiation) between turtles with temperature-dependent sex determination (Chrysemys picta) and turtles with genotypic sex determination (Apalone mutica) incubated under identical conditions. We were searching for key differences to understand the mechanics of both sex determining systems.
  • 2006. Valenzuela, N., LeClere A.R, and Shikano T. Comparative expression of steroidogenic factor 1 in Chrysemys picta and Apalone mutica turtles with environmental and genotypic sex determination. Evol. Dev. 8 (5): 424-432.
  • 2005. LeClere A.R. and N. Valenzuela. Comparative gene expression of multiple sex-determining genes in TSD and GSD turtles. Joint Meeting of the Society for the Study of Amphibians and Reptiles and the Herpetologists' League, Tampa, Florida.

 


Barbara Kagima

As an undergraduate, I worked on population genetics of Podocnemis unifilis turtles from Colombia and Peru, and on maternal-effect genes related to sex differentiation in Chrysemys picta turtles from North America. I completed my Master’s in 2008 in the EEB program at ISU working on Wildlife Management with Dr. Sue Fairbanks.

Barbara’s Website

  • 2005. Kagima, B. and N. Valenzuela. Maternal effect genes for sex determination in painted turtles, Chrysemys picta. Joint Meeting of the Society for the Study of Amphibians and Reptiles and the Herpetologists' League, Tampa, Florida.
  • 2004. Kagima, B., Valenzuela, N., Engstrom, T., and Bock, B. Preliminary population genetic study of the yellow spotted Amazon river turtle (Podocnemis unifilis) using microsatellite DNA data. Annual Meeting of the Society of Integrative and Comparative Biology, New Orleans, Louisiana.

 


Chris Chandler

I was a Ph.D. rotation student. I am interested in the evolution of sex determination.

 

 


Jeffrey Sander

I was a Ph.D. rotation student from the Bioinformatics & Computational Biology program.

 


Jacqueline Farrel

I was a MSc rotation student from the Interdepartmental Genetics program.