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 TE nest |
Highly repetitive genomes have multiple transposable element insertions within small clusters, resulting in nested transposons, with new repeats inserted into the sequence of existing elements. TE nest identifies, annotates, and displays chronological insertion of nested transposable elements. TE nest reconstructs the separated sections of nested transposable elements and calculates an estimated age since insertion in million years ago based on the divergence of flanking LTR sequences of LTR retrotransposons. |
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